PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00201g00011.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 511aa    MW: 57746.7 Da    PI: 4.5757
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00201g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.27.7e-08262309347
                               SS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +W++eE+el+ ++v    + lG++ W+  a +++  Rt+ +++s+++++
  Peaxi162Scf00201g00011.1 262 KWSEEEEELFHEVVfsnpASLGKNFWNHLAIEFP-SRTRRELVSYYFNV 309
                               8*************4444455666**********.***********996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007171.4E-4259312IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-4259321IPR009057Homeodomain-like
PfamPF002493.5E-6262309IPR001005SANT/Myb domain
PROSITE profilePS500906.144262310IPR017877Myb-like domain
CDDcd001670.00298262310No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MAQKRPFGEE ELYEVSSKQP RHAEPSCQLV SVLECSRESV APKAYASGGD EENFSRIKHD  60
ADNKPDSHNV AKAYFPFEKE TEMDIHGSAS NSSWPTSSTS EEDIRSEAPF HVLVSPEYYC  120
FDHSFRTVAH PREIYSSLLS DPRKMVPIGP DFQAELPEWG AYGNTNKANL DGVHKTLSLS  180
SQADENKLAG TCIVPMPKME LVADHGKNIG AGRAECSCED VGSIRCVRLH IMEARERLKL  240
ALGEETFVRL GFYEMGELIA EKWSEEEEEL FHEVVFSNPA SLGKNFWNHL AIEFPSRTRR  300
ELVSYYFNVF MLRKRSKQNR FDPLNIDSDD DEWQDEDEDS VIESPAYHNN LGYNGVYEEH  360
DKQMCYEDAS AATWDDCMPV NFSSRKIFTD VPESCLSKFF DRNNSYKHSM QPQDQGVPDE  420
VAEQEVQDSS HTTDAVRVTS ESSLGKTDNN GKHWASDFAG MRGASEHHSE WDAGYLSCAK  480
NEVELLPTRT MIEEVFGDGA WIYKRGGPGL G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009761172.10.0PREDICTED: uncharacterized protein LOC104213369 isoform X2
TrEMBLM1CA310.0M1CA31_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000631100.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15141625