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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00201g00011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | MYB_related | ||||||||
Protein Properties | Length: 511aa MW: 57746.7 Da PI: 4.5757 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.2 | 7.7e-08 | 262 | 309 | 3 | 47 |
SS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE+el+ ++v + lG++ W+ a +++ Rt+ +++s+++++ Peaxi162Scf00201g00011.1 262 KWSEEEEELFHEVVfsnpASLGKNFWNHLAIEFP-SRTRRELVSYYFNV 309 8*************4444455666**********.***********996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 1.4E-4 | 259 | 312 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.0E-4 | 259 | 321 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 3.5E-6 | 262 | 309 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS50090 | 6.144 | 262 | 310 | IPR017877 | Myb-like domain |
CDD | cd00167 | 0.00298 | 262 | 310 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 511 aa Download sequence Send to blast |
MAQKRPFGEE ELYEVSSKQP RHAEPSCQLV SVLECSRESV APKAYASGGD EENFSRIKHD 60 ADNKPDSHNV AKAYFPFEKE TEMDIHGSAS NSSWPTSSTS EEDIRSEAPF HVLVSPEYYC 120 FDHSFRTVAH PREIYSSLLS DPRKMVPIGP DFQAELPEWG AYGNTNKANL DGVHKTLSLS 180 SQADENKLAG TCIVPMPKME LVADHGKNIG AGRAECSCED VGSIRCVRLH IMEARERLKL 240 ALGEETFVRL GFYEMGELIA EKWSEEEEEL FHEVVFSNPA SLGKNFWNHL AIEFPSRTRR 300 ELVSYYFNVF MLRKRSKQNR FDPLNIDSDD DEWQDEDEDS VIESPAYHNN LGYNGVYEEH 360 DKQMCYEDAS AATWDDCMPV NFSSRKIFTD VPESCLSKFF DRNNSYKHSM QPQDQGVPDE 420 VAEQEVQDSS HTTDAVRVTS ESSLGKTDNN GKHWASDFAG MRGASEHHSE WDAGYLSCAK 480 NEVELLPTRT MIEEVFGDGA WIYKRGGPGL G |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009761172.1 | 0.0 | PREDICTED: uncharacterized protein LOC104213369 isoform X2 | ||||
TrEMBL | M1CA31 | 0.0 | M1CA31_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400063110 | 0.0 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1514 | 16 | 25 |